CDS

Accession Number TCMCG007C04699
gbkey CDS
Protein Id XP_009146450.1
Location join(1232599..1232767,1232863..1233134,1233910..1234584)
Gene LOC103870065
GeneID 103870065
Organism Brassica rapa

Protein

Length 371aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009148202.3
Definition NAC domain-containing protein 76 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category K
Description Transcription activator that binds to the secondary wall NAC binding element (SNBE), 5'- (T A)NN(C T)(T C G)TNNNNNNNA(A C)GN(A C T)(A T)-3', in the promoter of target genes (By similarity). Involved in xylem formation by promoting the expression of secondary wall-associated transcription factors and of genes involved in secondary wall biosynthesis and programmed cell death, genes driven by the secondary wall NAC binding element (SNBE). Triggers thickening of secondary walls
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003700        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010087        [VIEW IN EMBL-EBI]
GO:0010089        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043565        [VIEW IN EMBL-EBI]
GO:0044087        [VIEW IN EMBL-EBI]
GO:0044089        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048759        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1901348        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903338        [VIEW IN EMBL-EBI]
GO:1903340        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1905177        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000652        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAATCAGTTGATCAGTCATGTAGTGTTCCTCCGGGATTCAGATTCCATCCAACAGATGAAGAGCTCGTTGGTTACTATTTGAGGAAGAAAGTGGCTTCACAAAAGATCGATCTTGATGTCATTAGAGATATTGATCTCTACAGAATCGAACCGTGGGATTTACAAGAGAAATGCCGAATCGGATATGAGGAACGAAATGAATGGTATTTCTTCAGCCACAAAGATAAGAAATATCCAACGGGGACAAGGACGAACAGAGCGACCATCGCTGGTTTCTGGAAGGCCACAGGTCGAGACAAGGCTGTTTATGACAAGTCAAAACTAATTGGTATGAGGAAAACACTTGTATTCTACAAAGGAAGAGCCCCTAATGGCCAAAAAACTGATTGGATCATGCATGAATACCGGCTAGAGTCCGATGAGAATGCCCCTCCTCAGGAAGAAGGATGGGTGGTTTGTAGAGCTTTCAAGAAAAAACCAACGACCGGGCAAGCCAAGAACACAGAAACTTGGAGATCAAGTTACTTTTACGAAGAATTACCGACCGGAGTTGGCTCGGCTATGGAGCCTCTCAATTACGTATCTAAGCAGAAGCAAAACATTTTTGCACAAGATGTTTTGTTCAAGCAAGAACTAGGAGGGTCGGATATTGGTTTGAACTTCATCCACTGTGATCAATTCATCCAACTTCCGCAGCTAGAAAGCCCTCCACTCACTAATATGAAGAGGCCAATGAGCTCAACGTCAATAACATCATCGGAGAATATTCATAATAAGTACAAAAGACCACTAATAGAAGAGGACGAGCTAATAAATAGTCAAAATAAAGATAAGAGGAAGAGAACATCAGTGGTGACGACGGATTGGAGAGCACTTGATAAATTTGTTGCTTCTCAACTTATGAGCCAAGAGGAAGGAGTGTTAGATTTTGGTGGTCATAAAGAAGACGGCAGCAACAAAATTGGTCACTGCAATAACGAAGAGAGCAATAACAATGGAATAGAGATGGCTTCATCGTCGTTATTGAGTGATAGAGAAGAAGAGAACAGGTTCATCAGTGGGTTCTTGTGTACGAATTTGGACGATGACTTATATAGGGATTTGCATGTTTGA
Protein:  
MESVDQSCSVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIRDIDLYRIEPWDLQEKCRIGYEERNEWYFFSHKDKKYPTGTRTNRATIAGFWKATGRDKAVYDKSKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLESDENAPPQEEGWVVCRAFKKKPTTGQAKNTETWRSSYFYEELPTGVGSAMEPLNYVSKQKQNIFAQDVLFKQELGGSDIGLNFIHCDQFIQLPQLESPPLTNMKRPMSSTSITSSENIHNKYKRPLIEEDELINSQNKDKRKRTSVVTTDWRALDKFVASQLMSQEEGVLDFGGHKEDGSNKIGHCNNEESNNNGIEMASSSLLSDREEENRFISGFLCTNLDDDLYRDLHV